STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL26174.1Oligosaccharide repeat unit polymerase Wzy. (398 aa)    
Predicted Functional Partners:
KRL26172.1
Capsular biosynthesis protein.
 
 
 0.887
KRL26173.1
Glycosyltransferase.
  
 
  0.764
KRL26179.1
Polysaccharide biosynthesis protein.
  
 0.761
KRL26175.1
Putative extracellular protein.
 
    0.745
KRL26176.1
Galactofuranosyltransferase.
 
     0.745
KRL26171.1
Sugar transferase.
 
    0.734
KRL27676.1
Family S9 peptidase.
    
   0.611
KRL27782.1
Alpha beta superfamily hydrolase.
    
   0.611
KRL26178.1
UDP-galactopyranose mutase.
  
 
  0.603
KRL27307.1
Endolysin.
  
     0.589
Your Current Organism:
Lactobacillus frumenti
NCBI taxonomy Id: 1423746
Other names: L. frumenti DSM 13145, Lactobacillus frumenti DSM 13145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.