STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL28728.1Abc transporter, atp-binding protein. (192 aa)    
Predicted Functional Partners:
KRL28729.1
Zinc iron ABC transporter permease.
 
 0.999
KRL28727.1
ABC superfamily ATP binding cassette transporter, binding protein.
 
 
 0.995
KRL28064.1
Metal-dependent transcriptional regulator.
  
 
 0.827
KRL27752.1
ABC transporter-like protein.
 
 
 0.750
KRL27751.1
ABC transporter related.
 
 
0.731
KRL28441.1
Hypothetical protein.
  
  
  0.712
KRL27971.1
Binding-protein-dependent transport system inner membrane protein.
      
 0.502
KRL28730.1
Purine operon repressor.
       0.502
glmU
UDP-N-acetylglucosamine diphosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
       0.502
KRL27762.1
biotin-[acetyl-CoA-carboxylase] ligase and biotin operon repressor.
  
    0.478
Your Current Organism:
Lactobacillus frumenti
NCBI taxonomy Id: 1423746
Other names: L. frumenti DSM 13145, Lactobacillus frumenti DSM 13145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.