STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL58846.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
KRL58843.1
Hypothetical protein.
  
  
 0.904
KRL58842.1
Hypothetical protein.
  
  
 0.875
KRL58841.1
Type II IV secretion system family protein.
  
  
 0.860
KRL58845.1
Hypothetical protein.
       0.773
KRL58847.1
Hypothetical protein.
       0.757
KRL58844.1
Hypothetical protein.
       0.658
KRL58975.1
Hypothetical protein.
  
  
 0.581
KRL58848.1
Hypothetical protein.
       0.528
KRL60450.1
DEAD DEAH box helicase family protein.
   
  
 0.525
ackA
Ack2 protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.480
Your Current Organism:
Lactobacillus fuchuensis
NCBI taxonomy Id: 1423747
Other names: L. fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis DSM 14340, Lactobacillus fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis JCM 11249, Lactobacillus fuchuensis JCM 11249 = DSM 14340
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.