STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL58698.1PTS system, IIC component. (302 aa)    
Predicted Functional Partners:
KRL58697.1
PTS system, IID component.
 0.999
KRL58699.1
PTS system sugar-specific transporter subunit IIB.
 
 0.999
KRL61828.1
manL protein.
 
 0.998
KRL61830.1
PTS system, mannose fructose sorbose, IID component family protein.
 0.996
KRL59684.1
PTS system transporter subunit IID.
 0.996
KRL58696.1
Hypothetical protein.
 
 0.994
KRL58700.1
Phosphotransferase system fructose-specific component IIB.
 
 
 0.975
KRL59682.1
Phosphotransferase system, mannose fructose-specific component IIA.
 
 0.964
KRL59686.1
PTS system sugar-specific transporter subunit IIB.
 
 0.963
KRL58440.1
fruA protein.
  
 
 0.957
Your Current Organism:
Lactobacillus fuchuensis
NCBI taxonomy Id: 1423747
Other names: L. fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis DSM 14340, Lactobacillus fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis JCM 11249, Lactobacillus fuchuensis JCM 11249 = DSM 14340
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.