STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL58508.1Hypothetical protein. (228 aa)    
Predicted Functional Partners:
KRL58509.1
Hypothetical protein; Belongs to the TelA family.
 
  
 0.976
KRL58597.1
Tellurite resistance protein; Belongs to the TelA family.
 
  
 0.881
KRL60889.1
Hypothetical protein.
  
   
 0.802
KRL61708.1
yvlB like protein.
  
  
 0.791
KRL61590.1
Hypothetical protein.
  
     0.761
KRL60888.1
Hypothetical protein.
  
    0.704
KRL59512.1
Hypothetical protein.
  
     0.662
KRL58374.1
Hypothetical protein.
  
     0.625
KRL61011.1
Hypothetical protein.
  
     0.569
KRL62101.1
Peptidase propeptide and ypeb domain-containing protein.
  
     0.560
Your Current Organism:
Lactobacillus fuchuensis
NCBI taxonomy Id: 1423747
Other names: L. fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis DSM 14340, Lactobacillus fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis JCM 11249, Lactobacillus fuchuensis JCM 11249 = DSM 14340
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.