STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL61625.1Histidine kinase family protein. (374 aa)    
Predicted Functional Partners:
KRL61624.1
Response regulator.
 0.999
KRL61626.1
Hypothetical protein.
 
  
 0.967
KRL60887.1
Response regulator.
 0.967
KRL61627.1
ABC transporter family protein.
  
 0.962
KRL59161.1
Two-component system, response regulator YcbB.
  
 0.852
KRL61707.1
Hypothetical protein.
  
  
 0.583
KRL60889.1
Hypothetical protein.
  
  
 0.579
KRL61708.1
yvlB like protein.
  
  
 0.557
KRL61493.1
Serine threonine-protein kinase PrkC.
  
  
 0.551
KRL61622.1
Sppk.
  
 0.473
Your Current Organism:
Lactobacillus fuchuensis
NCBI taxonomy Id: 1423747
Other names: L. fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis DSM 14340, Lactobacillus fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis JCM 11249, Lactobacillus fuchuensis JCM 11249 = DSM 14340
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.