STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL61632.1Hypothetical protein. (360 aa)    
Predicted Functional Partners:
KRL61630.1
Hypothetical protein.
 
     0.799
KRL58541.1
Hypothetical protein.
  
     0.774
KRL61305.1
Cell surface protein.
  
     0.762
KRL61306.1
Cell surface protein.
  
     0.759
KRL61550.1
Hypothetical protein.
  
     0.715
KRL61635.1
Hypothetical protein.
 
    
0.628
KRL61633.1
Hypothetical protein.
       0.608
KRL61377.1
Hypothetical protein.
  
     0.603
KRL61631.1
Hypothetical protein.
       0.563
KRL61637.1
Hypothetical protein.
  
     0.511
Your Current Organism:
Lactobacillus fuchuensis
NCBI taxonomy Id: 1423747
Other names: L. fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis DSM 14340, Lactobacillus fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis JCM 11249, Lactobacillus fuchuensis JCM 11249 = DSM 14340
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.