STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL62107.1mvaK2 protein. (362 aa)    
Predicted Functional Partners:
KRL62106.1
Diphosphomevalonate decarboxylase.
 
 0.999
KRL62105.1
Mevalonate kinase.
 
 
 0.997
fni
Idi protein; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
 0.996
KRL60026.1
mvaS protein.
 
 
 0.906
KRL60025.1
mvaA protein; Belongs to the HMG-CoA reductase family.
 
 0.883
dinG
Hypothetical protein; 3'-5' exonuclease.
 
     0.597
rexB
ATP-dependent helicase deoxyribonuclease subunit B; ATP-dependent DNA helicase.
 
     0.529
KRL60024.1
Hypothetical protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.528
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
   0.508
addA
Recombination helicase AddA; ATP-dependent DNA helicase.
       0.466
Your Current Organism:
Lactobacillus fuchuensis
NCBI taxonomy Id: 1423747
Other names: L. fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis DSM 14340, Lactobacillus fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis JCM 11249, Lactobacillus fuchuensis JCM 11249 = DSM 14340
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