STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL60961.1Universal stress family protein. (144 aa)    
Predicted Functional Partners:
KRL60962.1
mntH1 protein.
  
  
 0.783
KRL60960.1
Hypothetical protein.
 
     0.696
KRL61852.1
Usp6 protein.
  
    0.600
KRL61534.1
Usp3 protein.
  
     0.453
KRL60963.1
Hypothetical protein.
       0.444
KRL60996.1
Hypothetical protein.
  
     0.435
KRL59267.1
Septum formation initiator family protein.
  
    0.415
KRL60964.1
Hypothetical protein.
       0.411
KRL61249.1
Usp4 protein.
  
   
 0.409
KRL61259.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Lactobacillus fuchuensis
NCBI taxonomy Id: 1423747
Other names: L. fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis DSM 14340, Lactobacillus fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis JCM 11249, Lactobacillus fuchuensis JCM 11249 = DSM 14340
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.