STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL59014.1Hypothetical protein. (133 aa)    
Predicted Functional Partners:
KRL61748.1
nagE protein.
   
 
 0.819
KRL59614.1
Hypothetical protein.
   
 
 0.819
pgi
Pgi protein; Belongs to the GPI family.
  
 
 0.760
KRL61602.1
Hypothetical protein.
    
 0.755
KRL59308.1
Fba protein.
   
 
 0.717
KRL59110.1
Fructose-bisphosphate aldolase.
   
 
 0.717
KRL61567.1
Hypothetical protein.
  
 
 0.610
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.555
KRL60823.1
Hypothetical protein.
  
 
 0.506
KRL59875.1
AraC family transcriptional regulator.
  
 
 0.494
Your Current Organism:
Lactobacillus fuchuensis
NCBI taxonomy Id: 1423747
Other names: L. fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis DSM 14340, Lactobacillus fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis JCM 11249, Lactobacillus fuchuensis JCM 11249 = DSM 14340
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.