STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL20394.1Hexulose. (378 aa)    
Predicted Functional Partners:
KRL24689.1
Hypothetical protein.
 
     0.772
KRL20656.1
Hypothetical protein.
 
     0.704
KRL23204.1
Hypothetical protein.
  
     0.690
KRL24693.1
Hypothetical protein.
  
     0.672
KRL24694.1
Hypothetical protein.
  
     0.666
KRL24695.1
Hypothetical protein.
  
     0.659
KRL25130.1
Bacteriocin abc transporter.
 
    0.609
KRL25128.1
Hypothetical protein.
  
     0.569
KRL23754.1
Cell envelope-associated proteinase; Belongs to the peptidase S8 family.
  
     0.496
KRL24704.1
Cell division protein.
  
     0.494
Your Current Organism:
Lactobacillus gallinarum
NCBI taxonomy Id: 1423748
Other names: L. gallinarum DSM 10532 = JCM 2011, Lactobacillus gallinarum DSM 10532, Lactobacillus gallinarum DSM 10532 = JCM 2011, Lactobacillus gallinarum JCM 2011, Lactobacillus gallinarum JCM 2011 = DSM 10532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.