STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL21114.1Flavodoxin. (148 aa)    
Predicted Functional Partners:
KRL21113.1
Cell wall teichoic acid glycosylation protein.
       0.811
map
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
 
    0.568
KRL20058.1
Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
    0.505
KRL21115.1
Hypothetical protein.
       0.491
KRL19712.1
Ribonucleoside-diphosphate reductase subunit beta.
 
    0.487
KRL24265.1
Hypothetical protein.
  
     0.450
KRL21116.1
Hypothetical protein.
       0.444
KRL21118.1
Hypothetical protein; Belongs to the UPF0761 family.
       0.443
recX
Regulatory protein recx; Modulates RecA activity; Belongs to the RecX family.
 
 
   0.416
Your Current Organism:
Lactobacillus gallinarum
NCBI taxonomy Id: 1423748
Other names: L. gallinarum DSM 10532 = JCM 2011, Lactobacillus gallinarum DSM 10532, Lactobacillus gallinarum DSM 10532 = JCM 2011, Lactobacillus gallinarum JCM 2011, Lactobacillus gallinarum JCM 2011 = DSM 10532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.