STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL20654.1ABC transporter. (509 aa)    
Predicted Functional Partners:
KRL20656.1
Hypothetical protein.
 
     0.778
KRL24691.1
Hypothetical protein.
  
     0.678
KRL20655.1
Hypothetical protein.
       0.636
KRL23255.1
Hypothetical protein.
  
     0.606
KRL20605.1
ABC superfamily ATP binding cassette transporter ABC protein.
 
 
   0.599
KRL22212.1
Hypothetical protein.
 
  0.578
KRL24548.1
ABC transporter ATPase component.
 
  0.566
KRL24698.1
Hypothetical protein.
  
     0.546
KRL25412.1
Hypothetical protein.
  
     0.544
KRL23260.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
  0.543
Your Current Organism:
Lactobacillus gallinarum
NCBI taxonomy Id: 1423748
Other names: L. gallinarum DSM 10532 = JCM 2011, Lactobacillus gallinarum DSM 10532, Lactobacillus gallinarum DSM 10532 = JCM 2011, Lactobacillus gallinarum JCM 2011, Lactobacillus gallinarum JCM 2011 = DSM 10532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.