STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL20564.1Oligopeptide ABC transporter, oligopeptide-binding protein. (590 aa)    
Predicted Functional Partners:
KRL23861.1
Hypothetical protein.
 
 
 0.848
KRL23860.1
Oligopeptide ABC transporter, permease protein.
 
 
 0.788
KRL23863.1
Oligopeptide ABC transporter; Belongs to the ABC transporter superfamily.
 
  
 0.692
KRL23862.1
Abc-type oligopeptide transport system, atpase component; Belongs to the ABC transporter superfamily.
 
  
 0.687
KRL21299.1
Amino acid abc transporter permease protein.
 
 
 0.481
KRL21317.1
Glutamine ABC superfamily ATP binding cassette transporter, permease protein.
  
 
 0.414
Your Current Organism:
Lactobacillus gallinarum
NCBI taxonomy Id: 1423748
Other names: L. gallinarum DSM 10532 = JCM 2011, Lactobacillus gallinarum DSM 10532, Lactobacillus gallinarum DSM 10532 = JCM 2011, Lactobacillus gallinarum JCM 2011, Lactobacillus gallinarum JCM 2011 = DSM 10532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.