STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM06942.1N-acetylglucosamine metabolism protein NagD; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family. (257 aa)    
Predicted Functional Partners:
KRM06943.1
Hypothetical protein.
 
  
 0.932
KRM06941.1
Intergral membrane protein.
  
    0.921
KRM06944.1
Metallophosphoesterase; Belongs to the 5'-nucleotidase family.
  
    0.835
KRM06945.1
Phosphoesterase.
  
    0.647
KRM07885.1
Recombination factor protein RarA.
 
      0.633
KRM05927.1
ComX; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.562
KRM05597.1
Glycerophosphoryl diester phosphodiesterase.
    
  0.531
KRM07612.1
Hypothetical protein.
   
    0.529
KRM06948.1
Adenine-specific DNA methylase.
 
     0.519
KRM06497.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.513
Your Current Organism:
Lactobacillus ghanensis
NCBI taxonomy Id: 1423750
Other names: L. ghanensis DSM 18630, Lactobacillus ghanensis DSM 18630
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