STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM06107.1Hypothetical protein. (385 aa)    
Predicted Functional Partners:
KRM06430.1
Fumarate reductase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.941
KRM06108.1
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.890
KRM06106.1
NADPH-dependent FMN reductase.
 
   
0.810
KRM06044.1
Transcription regulator.
  
 
 0.738
KRM05633.1
Oxidoreductase.
  
 0.640
KRM05704.1
ABC transporter substrate-binding protein.
  
 
  0.629
KRM05709.1
AraC-like transcriptional regulator.
  
 
  0.544
KRM05702.1
ABC transporter permease.
  
 
  0.529
KRM05701.1
ABC transporter ATP-binding protein.
 
 
 0.516
KRM04882.1
Hypothetical protein.
     
 0.501
Your Current Organism:
Lactobacillus ghanensis
NCBI taxonomy Id: 1423750
Other names: L. ghanensis DSM 18630, Lactobacillus ghanensis DSM 18630
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