STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM06208.1Oligopeptide transporter ATP-binding protein OppF. (256 aa)    
Predicted Functional Partners:
KRM06205.1
Binding-protein-dependent transport systems inner membrane component.
 
 0.996
KRM05551.1
Peptide nickel transport system permease protein.
 
 0.984
KRM06204.1
Dipeptide transport system permease protein DppB.
 
 0.974
KRM04528.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 0.921
KRM06203.1
Hypothetical protein.
 
 0.885
KRM05552.1
Oligopeptide transport system permease protein.
 
 0.869
pstB-3
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.852
KRM06207.1
Peptide ABC transporter, ATP-binding protein.
 
    
0.821
KRM04529.1
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.816
KRM06206.1
Hypothetical protein.
       0.773
Your Current Organism:
Lactobacillus ghanensis
NCBI taxonomy Id: 1423750
Other names: L. ghanensis DSM 18630, Lactobacillus ghanensis DSM 18630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.