STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM06317.1Hypothetical protein. (437 aa)    
Predicted Functional Partners:
KRM06318.1
Hypothetical protein.
 
 
 0.973
KRM06184.1
Hypothetical protein.
 
  
 
0.884
KRM05693.1
Hypothetical protein.
 
 
 0.883
KRM06183.1
Two component transcriptional regulator, lyttr fa mily.
 
 
 0.878
KRM06305.1
Propanediol utilization protein PduB.
 
  
 0.842
KRM05977.1
Chemotaxis protein CheY.
  
 
 0.838
KRM04599.1
Hypothetical protein.
  
 
 0.838
KRM05935.1
Transcriptional regulator.
 
  
  0.823
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
       0.820
KRM06302.1
Hypothetical protein.
 
  
 0.778
Your Current Organism:
Lactobacillus ghanensis
NCBI taxonomy Id: 1423750
Other names: L. ghanensis DSM 18630, Lactobacillus ghanensis DSM 18630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.