STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM05724.1Hypothetical protein. (417 aa)    
Predicted Functional Partners:
KRM05526.1
Hypothetical protein.
 
 
 0.955
KRM05527.1
PTS system, lactose cellobiose-specific IIB subunit.
 
 
 0.952
KRM07037.1
PTS family lactose cellobiose porter component IIA.
 
 
 0.948
KRM07038.1
Cellobiose PTS, EIIB.
 
 
 0.943
KRM05717.1
Cellobiose-specific PTS system IIA component.
 
 
 0.943
KRM05716.1
Hypothetical protein.
 
 
 0.942
KRM05723.1
Alpha beta hydrolase superfamily protein.
 
     0.933
KRM05714.1
PTS family oligomeric beta-glucoside porter component IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
  0.932
KRM05708.1
Pts family oligomeric beta-glucoside porter component iic; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
  0.917
KRM07039.1
Cellobiose pts, eiic; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
 
0.895
Your Current Organism:
Lactobacillus ghanensis
NCBI taxonomy Id: 1423750
Other names: L. ghanensis DSM 18630, Lactobacillus ghanensis DSM 18630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.