STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM05266.1NCAIR mutase (PurE)-related protein. (254 aa)    
Predicted Functional Partners:
KRM05268.1
PP family ATPase.
  
 0.983
larC-2
Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.
 
  
 0.980
KRM06179.1
Hypothetical protein.
  
 0.927
larC
Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.
  
 0.924
KRM05265.1
Hypothetical protein.
  
  
 0.916
KRM05264.1
cAMP-binding protein.
  
  
 0.795
KRM05269.1
Glycerol uptake facilitator related permease (major Intrinsic protein family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.785
KRM06175.1
Hypothetical protein.
  
  
 0.643
KRM06174.1
Transcriptional regulator.
  
  
 0.614
KRM05270.1
High-affinity nickel permease; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.575
Your Current Organism:
Lactobacillus ghanensis
NCBI taxonomy Id: 1423750
Other names: L. ghanensis DSM 18630, Lactobacillus ghanensis DSM 18630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.