STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM07984.1Ascorbate-specific permease IIC component UlaA. (460 aa)    
Predicted Functional Partners:
KRM03972.1
PTS system L-ascorbate transporter subunit IIA.
 
 
 0.955
KRM03971.1
Transcriptional regulator ManR.
 
 
 0.941
KRM03973.1
Hypothetical protein.
 
 
 0.915
KRM03980.1
Hypothetical protein.
 
 
 0.903
KRM06789.1
Phosphocarrier protein.
    
 0.880
KRM05241.1
Transcription regulator.
  
 
 0.810
KRM07985.1
Hypothetical protein.
       0.684
KRM03975.1
Sugar isomerase (sis).
 
     0.635
KRM05661.1
Fructose PTS, EIIABC.
  
 
 0.599
KRM07097.1
Riboflavin synthase subunit alpha.
   
    0.551
Your Current Organism:
Lactobacillus ghanensis
NCBI taxonomy Id: 1423750
Other names: L. ghanensis DSM 18630, Lactobacillus ghanensis DSM 18630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.