STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM03993.1Exonuclease of the beta-lactamase fold protein. (415 aa)    
Predicted Functional Partners:
KRM03992.1
Sugar ABC transporter substrate-binding protein.
 
     0.923
KRM03994.1
2, 3-cyclic-nucleotide 2-phosphodiesterase; Belongs to the 5'-nucleotidase family.
 
     0.894
rnj-2
Metallo-beta-lactamase superfamily protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
     
 0.882
rnj
Metallo-beta-lactamase superfamily protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
     
 0.881
KRM03989.1
Sugar ABC transporterATPase.
 
     0.840
KRM03991.1
Maltose ABC transporter permease.
 
     0.793
KRM03990.1
Sugar ABC transporterpermease.
 
     0.775
rny
Phosphodiesterase; Endoribonuclease that initiates mRNA decay.
  
 
 0.636
KRM07749.1
Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
    0.509
KRM05804.1
Polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
    0.509
Your Current Organism:
Lactobacillus ghanensis
NCBI taxonomy Id: 1423750
Other names: L. ghanensis DSM 18630, Lactobacillus ghanensis DSM 18630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.