STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM04007.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
KRM04005.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, sorbose specific.
 
 0.991
KRM04006.1
PTS system, IID component.
 
 0.987
KRM07155.1
PTS family mannose fructose sorbose porter component IIC.
 
 0.964
KRM07122.1
PTS system transporter subunit IID.
 
 0.950
KRM04004.1
Hypothetical protein.
 
 
 0.946
KRM07156.1
Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific.
 
 
 0.939
KRM07124.1
PTS system transporter subunit IIC.
 
 0.937
KRM05824.1
Pts systemmannose-specific iic component.
  
 0.936
KRM06789.1
Phosphocarrier protein.
   
 0.933
KRM04049.1
Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IIC.
 
 0.927
Your Current Organism:
Lactobacillus ghanensis
NCBI taxonomy Id: 1423750
Other names: L. ghanensis DSM 18630, Lactobacillus ghanensis DSM 18630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.