STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM04060.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
KRM05504.1
Hypothetical protein.
  
     0.657
KRM07981.1
Hypothetical protein.
  
     0.648
KRM05649.1
Hypothetical protein.
  
     0.620
KRM07947.1
Hypothetical protein.
  
     0.620
KRM08256.1
Integrase recombinase xerD.
  
     0.609
KRM04493.1
Hypothetical protein.
  
     0.608
KRM04397.1
Hypothetical protein.
  
     0.602
KRM07736.1
Hypothetical protein.
  
     0.598
KRM07737.1
Hypothetical protein.
  
     0.592
KRM07685.1
Transcription regulator.
  
     0.579
Your Current Organism:
Lactobacillus ghanensis
NCBI taxonomy Id: 1423750
Other names: L. ghanensis DSM 18630, Lactobacillus ghanensis DSM 18630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.