STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM04063.1Hypothetical protein. (564 aa)    
Predicted Functional Partners:
KRM04064.1
Hypothetical protein.
 
     0.795
KRM05990.1
Glycosyl transferase family 2.
  
     0.602
KRM05649.1
Hypothetical protein.
  
     0.594
KRM05639.1
Hypothetical protein.
  
     0.575
KRM05757.1
Transcription regulator.
  
     0.566
KRM05954.1
Hypothetical protein.
  
     0.561
KRM04062.1
Hypothetical protein.
 
     0.505
KRM05653.1
Hypothetical protein.
  
     0.500
KRM04559.1
Hypothetical protein; Belongs to the DapB family.
  
     0.499
KRM05289.1
Hypothetical protein.
 
    0.489
Your Current Organism:
Lactobacillus ghanensis
NCBI taxonomy Id: 1423750
Other names: L. ghanensis DSM 18630, Lactobacillus ghanensis DSM 18630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.