STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN12010.1Hypothetical protein. (459 aa)    
Predicted Functional Partners:
KRN12011.1
Hypothetical protein.
     0.917
KRN12008.1
Phage major tail protein.
 
     0.844
KRN12006.1
Hypothetical protein.
 
     0.843
KRN12001.1
Portal protein.
 
     0.823
KRN12003.1
Major head protein.
 
     0.823
KRN12000.1
Phage terminase.
 
     0.809
KRN11999.1
Hypothetical protein.
 
     0.800
KRN11998.1
Phage endonuclease.
 
     0.795
KRN12002.1
Phage clp-protease; Belongs to the peptidase S14 family.
 
  
 0.788
KRN10130.1
Phage nucleotide-binding protein.
  
     0.707
Your Current Organism:
Lactobacillus gigeriorum
NCBI taxonomy Id: 1423751
Other names: L. gigeriorum DSM 23908 = CRBIP 24.85, Lactobacillus gigeriorum 202, Lactobacillus gigeriorum CRBIP 24.85, Lactobacillus gigeriorum CRBIP 24.85 = DSM 23908, Lactobacillus gigeriorum DSM 23908, Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.