STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN11828.1ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (368 aa)    
Predicted Functional Partners:
KRN11825.1
Maltose ABC transporter permease protein.
 
 0.999
KRN11826.1
Cyclodextrin ABc transporter membrane protein.
 
 0.999
KRN12275.1
ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.992
KRN12276.1
Abc superfamily atp binding cassette transporter, permease protein.
 0.992
KRN11827.1
Maltose ABC transporter permease.
 
 0.991
KRN11728.1
Carbohydrate abc superfamily atp binding cassette transporter, membrane protein.
 
 0.954
KRN11729.1
Sugar abc transporter, permease protein.
 
 0.939
KRN12822.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
  
 
0.925
KRN14659.1
ABC transporter ATPase component.
     
0.900
KRN13247.1
Multidrug ABC superfamily ATP binding cassette transporter, ABC protein.
 
     
0.885
Your Current Organism:
Lactobacillus gigeriorum
NCBI taxonomy Id: 1423751
Other names: L. gigeriorum DSM 23908 = CRBIP 24.85, Lactobacillus gigeriorum 202, Lactobacillus gigeriorum CRBIP 24.85, Lactobacillus gigeriorum CRBIP 24.85 = DSM 23908, Lactobacillus gigeriorum DSM 23908, Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.