STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN11734.1Transcription regulator. (362 aa)    
Predicted Functional Partners:
KRN09920.1
Phosphoenolpyruvate-dependent sugar PTS family porter EIIABC, trhalose specific.
  
 
 0.930
KRN14241.1
Sucrose PTS II ABC.
  
 
 0.930
KRN11735.1
Alpha-1,2-mannosidase.
 
     0.918
KRN11732.1
Alpha-mannosidase.
 
    0.871
KRN11731.1
Family 20 glycoside hydrolase.
 
   
 0.840
KRN11727.1
Sugar ABC transporter substrate-binding protein.
 
   
 0.793
KRN11725.1
Histidine protein kinase.
 
     0.771
KRN09150.1
Catabolite control protein A.
  
     0.765
KRN14396.1
Sucrose operon repressor scrr.
  
     0.761
KRN14884.1
Phosphocarrier protein HPr.
   
 
 0.758
Your Current Organism:
Lactobacillus gigeriorum
NCBI taxonomy Id: 1423751
Other names: L. gigeriorum DSM 23908 = CRBIP 24.85, Lactobacillus gigeriorum 202, Lactobacillus gigeriorum CRBIP 24.85, Lactobacillus gigeriorum CRBIP 24.85 = DSM 23908, Lactobacillus gigeriorum DSM 23908, Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.