STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN13781.1His Glu Gln Arg opine family amino acid ABC superfamily ATP binding cassette transporter. (552 aa)    
Predicted Functional Partners:
KRN13782.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 0.998
KRN11771.1
ABC-type polar amino acid transport system, ATPase component.
 0.991
KRN13766.1
Amino acid ABC transporter, ATP-binding protein.
 0.991
KRN12259.1
Glutamine ABC transporter.
 0.979
KRN13767.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
 
0.945
KRN14835.1
Oligopeptide ABC transporter ATPase.
    
 0.820
KRN12822.1
ABC superfamily ATP binding cassette transporter, ABC protein.
    
 0.820
KRN11770.1
Amino acid ABC superfamily ATP binding cassette transporter, binding protein.
 
 0.749
KRN14213.1
ABC superfamily ATP binding cassette transporter, binding protein.
 
 
 0.734
KRN10214.1
Cell division ATP-binding protein FtsE.
 
 
 0.729
Your Current Organism:
Lactobacillus gigeriorum
NCBI taxonomy Id: 1423751
Other names: L. gigeriorum DSM 23908 = CRBIP 24.85, Lactobacillus gigeriorum 202, Lactobacillus gigeriorum CRBIP 24.85, Lactobacillus gigeriorum CRBIP 24.85 = DSM 23908, Lactobacillus gigeriorum DSM 23908, Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.