STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN13792.1Hypothetical protein. (134 aa)    
Predicted Functional Partners:
KRN13791.1
Endoglucanase.
     0.953
KRN09860.1
Glycosyltransferase.
 
 
 0.894
KRN11171.1
Hypothetical protein.
  
     0.523
KRN11043.1
Hypothetical protein.
  
     0.513
KRN10640.1
beta-N-acetylhexosaminidase.
    
 0.479
KRN11759.1
Hypothetical protein.
  
     0.475
KRN13793.1
Hypothetical protein.
       0.462
KRN09151.1
UTP-glucose-1-phosphate uridylyltransferase.
    
  0.437
KRN11823.1
Hypothetical protein.
  
     0.432
KRN13870.1
Hypothetical protein.
  
     0.430
Your Current Organism:
Lactobacillus gigeriorum
NCBI taxonomy Id: 1423751
Other names: L. gigeriorum DSM 23908 = CRBIP 24.85, Lactobacillus gigeriorum 202, Lactobacillus gigeriorum CRBIP 24.85, Lactobacillus gigeriorum CRBIP 24.85 = DSM 23908, Lactobacillus gigeriorum DSM 23908, Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.