STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM23661.1Pts system mannose fructose n-acetylgalactosamine-specific transporter subunit iib. (158 aa)    
Predicted Functional Partners:
KRM23660.1
Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IID.
 
 0.999
KRM23664.1
Hypothetical protein.
 
 
 0.988
KRM23659.1
Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific.
 
 0.987
KRM23817.1
PTS system, Fru family, IIC component domain protein.
  
 
 0.981
KRM21381.1
PTS system, mannose fructose sorbose, IID component family protein.
 
 0.980
KRM21382.1
manM protein.
 
 0.955
KRM21062.1
ptsH protein.
   
 0.900
KRM23662.1
Transcriptional regulator.
       0.746
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
       0.737
KRM21383.1
PTS system mannose-specific EIIAB component.
 
 
0.732
Your Current Organism:
Lactobacillus graminis
NCBI taxonomy Id: 1423752
Other names: L. graminis DSM 20719, Lactobacillus graminis DSM 20719
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.