STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM24332.1ABC transporter family protein. (226 aa)    
Predicted Functional Partners:
KRM24333.1
ABC 3 transport family protein.
 0.998
KRM24331.1
Periplasmic solute binding family protein.
 
 0.994
KRM23405.1
ABC 3 transport family protein.
 0.967
KRM23989.1
Oligopeptide dipeptide ABC transporter, ATP-binding, C-terminal domain protein; Belongs to the ABC transporter superfamily.
 
   
 
0.941
KRM23931.1
ABC-type transporter ATP-binding protein EcsA.
 
 
0.829
KRM23406.1
Manganese ABC transporter substrate-binding lipoprotein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.822
KRM23824.1
Amino ABC transporter, permease, 3-TM region, His Glu Gln Arg opine family domain protein.
 
   
 0.818
KRM21037.1
Amino ABC transporter, permease, 3-TM region, His Glu Gln Arg opine family domain protein.
 
   
 0.818
KRM21147.1
Spermidine putrescine ABC transporter transmembrane protein.
     
 0.807
KRM24434.1
Hypothetical protein.
  
  
  0.783
Your Current Organism:
Lactobacillus graminis
NCBI taxonomy Id: 1423752
Other names: L. graminis DSM 20719, Lactobacillus graminis DSM 20719
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