STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM22345.1NifU-like protein involved in Fe-S cluster assembly. (163 aa)    
Predicted Functional Partners:
KRM22346.1
Cysteine desulfurase, SufS subfamily protein; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 0.999
KRM22292.1
Aminotransferase class-V family protein.
 
 0.980
KRM23868.1
Aminotransferase class-V family protein.
 0.979
KRM22347.1
feS assembly protein SufD.
 
  
 0.978
KRM22348.1
feS assembly ATPase SufC.
 
  
 0.972
KRM22344.1
feS assembly protein SufB.
 
  
 0.966
dnaK
dnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.918
KRM22214.1
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
   
   0.707
KRM22278.1
Cardiolipin synthetase.
   
   0.707
KRM22248.1
Hypothetical protein.
  
    0.672
Your Current Organism:
Lactobacillus graminis
NCBI taxonomy Id: 1423752
Other names: L. graminis DSM 20719, Lactobacillus graminis DSM 20719
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