STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM23926.1Hypothetical protein. (903 aa)    
Predicted Functional Partners:
KRM23925.1
Calcineurin-like phosphoesterase family protein.
 
 
 0.971
KRM23927.1
HDIG domain protein.
  
    0.847
KRM23924.1
Hypothetical protein; Belongs to the UPF0342 family.
 
     0.676
KRM21107.1
marR family protein.
  
     0.632
KRM23923.1
Penicillin-binding, 1A family protein.
       0.596
KRM23613.1
marR family protein.
  
     0.553
KRM24436.1
Calcineurin-like phosphoesterase family protein; Belongs to the 5'-nucleotidase family.
  
     0.541
KRM23831.1
Hypothetical protein.
  
    0.532
KRM24277.1
Hypothetical protein.
  
     0.529
KRM21112.1
dnaD and phage-associated domain protein.
  
     0.475
Your Current Organism:
Lactobacillus graminis
NCBI taxonomy Id: 1423752
Other names: L. graminis DSM 20719, Lactobacillus graminis DSM 20719
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.