STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM23804.1Lipoprotein. (312 aa)    
Predicted Functional Partners:
KRM20972.1
Hypothetical protein.
  
     0.758
KRM24248.1
Hypothetical protein.
  
     0.723
KRM22247.1
SAM-dependent methyltransferase.
  
     0.658
KRM21039.1
Xylose isomerase-like TIM barrel family protein.
  
     0.588
KRM23805.1
Inner membrane transporter yjeM.
       0.558
KRM23809.1
Hypothetical protein.
 
     0.552
KRM22380.1
Hypothetical protein.
  
     0.534
KRM24042.1
Hypothetical protein.
  
     0.526
KRM24427.1
Hypothetical protein.
   
    0.513
KRM23885.1
Hypothetical protein.
  
     0.513
Your Current Organism:
Lactobacillus graminis
NCBI taxonomy Id: 1423752
Other names: L. graminis DSM 20719, Lactobacillus graminis DSM 20719
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.