STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM23842.1Hypothetical protein. (96 aa)    
Predicted Functional Partners:
KRM23841.1
RNA methyltransferase, RsmD family.
  
    0.891
KRM23839.1
Lipoprotein precursor.
       0.837
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.837
KRM23844.1
Cell cycle family protein; Belongs to the SEDS family.
       0.779
KRM24038.1
Hypothetical protein.
  
     0.724
KRM23843.1
Hypothetical protein.
       0.724
KRM23845.1
Hypothetical protein; Belongs to the UPF0358 family.
       0.630
KRM23838.1
comE operon protein 1.
       0.621
KRM23858.1
Hypothetical protein; Belongs to the UPF0356 family.
  
     0.614
KRM24437.1
yutD domain protein.
  
     0.584
Your Current Organism:
Lactobacillus graminis
NCBI taxonomy Id: 1423752
Other names: L. graminis DSM 20719, Lactobacillus graminis DSM 20719
Server load: low (18%) [HD]