STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM20984.1Bacterial regulatory s, lacI family protein. (312 aa)    
Predicted Functional Partners:
KRM20985.1
Cof-like hydrolase family protein.
    0.825
KRM23649.1
Beta-glucosides PTS, EIIBCA.
  
 
 0.813
KRM24533.1
PTS system beta-glucoside-specific EIIBCA component.
  
 
 0.813
KRM23398.1
PTS system, beta-glucoside-specific IIABC component.
  
 
 0.813
KRM24128.1
Beta-glucoside-specific phosphotransferase system (PTS), IIABC component.
  
 
 0.813
KRM24236.1
nagE protein.
  
 
 0.813
KRM22423.1
Phosphotransferase system, EIIC family protein.
  
 
 0.813
KRM24203.1
Transcription regulator.
  
     0.751
KRM24053.1
Bacterial regulatory s, lacI family protein.
  
     0.744
KRM23800.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.725
Your Current Organism:
Lactobacillus graminis
NCBI taxonomy Id: 1423752
Other names: L. graminis DSM 20719, Lactobacillus graminis DSM 20719
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.