STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM21175.1Hypothetical protein. (77 aa)    
Predicted Functional Partners:
KRM21176.1
Glucokinase.
  
    0.850
KRM21177.1
Rhodanese-like domain protein.
       0.793
KRM21174.1
Rhomboid family protein.
       0.771
KRM21173.1
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.761
KRM21967.1
Hypothetical protein; Belongs to the UPF0346 family.
  
     0.736
KRM23858.1
Hypothetical protein; Belongs to the UPF0356 family.
  
    0.707
KRM21172.1
Transpeptidase penicillin-binding protein 2B.
       0.549
KRM22296.1
Hypothetical protein.
 
    0.512
KRM23782.1
Tetratricopeptide repeat family protein.
 
     0.508
rpsK
rpsK protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
   
    0.491
Your Current Organism:
Lactobacillus graminis
NCBI taxonomy Id: 1423752
Other names: L. graminis DSM 20719, Lactobacillus graminis DSM 20719
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.