STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL98262.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
KRL95836.1
Hypothetical protein.
 
    0.738
KRL95528.1
XRE family transcriptional regulator.
  
     0.632
KRL95835.1
Hypothetical protein.
 
     0.573
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
    
 0.554
KRL93312.1
Isochorismatase family protein.
 
     0.466
KRL97042.1
Hypothetical protein.
  
     0.460
KRL94276.1
Hypothetical protein.
  
     0.456
KRL94751.1
Hypothetical protein.
  
     0.453
KRL98263.1
Hypothetical protein.
       0.427
KRL94562.1
XRE family transcriptional regulator.
  
   
 0.415
Your Current Organism:
Lactobacillus hammesii
NCBI taxonomy Id: 1423753
Other names: L. hammesii DSM 16381, Lactobacillus hammesii DSM 16381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.