STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL94647.1Outer membrane protein. (429 aa)    
Predicted Functional Partners:
KRL93690.1
Hypothetical protein.
 
  
 0.779
KRL98135.1
Hypothetical protein.
 
  
 0.778
KRL93895.1
Hypothetical protein.
  
     0.775
KRL95728.1
Hypothetical protein.
  
     0.769
KRL95726.1
Hypothetical protein.
 
  
 0.767
KRL95729.1
Hypothetical protein.
  
     0.767
KRL95730.1
Hypothetical protein.
  
     0.763
KRL95727.1
Hypothetical protein.
  
     0.760
KRL95725.1
Hypothetical protein.
 
  
 0.758
KRL94387.1
Signal transduction protein.
  
     0.753
Your Current Organism:
Lactobacillus hammesii
NCBI taxonomy Id: 1423753
Other names: L. hammesii DSM 16381, Lactobacillus hammesii DSM 16381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.