STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL94276.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
KRL94277.1
Hypothetical protein.
       0.664
KRL94278.1
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like.
       0.503
KRL98135.1
Hypothetical protein.
  
     0.498
KRL94647.1
Outer membrane protein.
  
     0.498
KRL95728.1
Hypothetical protein.
  
     0.497
KRL98110.1
Hypothetical protein.
  
     0.490
KRL93690.1
Hypothetical protein.
  
     0.484
KRL95726.1
Hypothetical protein.
  
     0.480
KRL93679.1
Transcriptional regulator.
  
     0.476
KRL95725.1
Hypothetical protein.
  
     0.470
Your Current Organism:
Lactobacillus hammesii
NCBI taxonomy Id: 1423753
Other names: L. hammesii DSM 16381, Lactobacillus hammesii DSM 16381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.