STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL93663.1D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (429 aa)    
Predicted Functional Partners:
KRL96180.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 
0.956
KRL95168.1
Membrane carboxypeptidase (penicillin-binding protein).
  
 
 0.947
KRL95791.1
Membrane carboxypeptidase (penicillin-binding protein).
  
 
 0.943
KRL93531.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
  
 
0.804
KRL93530.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
  
 
0.803
KRL94765.1
Cell division protein FtsI.
 
 
 0.706
KRL93120.1
Cell division protein FtsI.
  
 
 0.669
KRL94732.1
Cell wall-associated hydrolase.
  
 
 0.664
KRL94088.1
Periplasmic protease.
 
 
 0.632
KRL93761.1
Microcin C7 resistance MccF related protein.
    
 0.596
Your Current Organism:
Lactobacillus hammesii
NCBI taxonomy Id: 1423753
Other names: L. hammesii DSM 16381, Lactobacillus hammesii DSM 16381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.