STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL93856.1Transcriptional regulator. (194 aa)    
Predicted Functional Partners:
KRL94813.1
Hypothetical protein.
 
   0.752
KRL94388.1
Signal transduction protein.
  
     0.690
KRL94387.1
Signal transduction protein.
  
     0.677
KRL94389.1
Response regulator.
  
    0.546
KRL93843.1
Hypothetical protein.
  
     0.542
KRL94371.1
Myosin-cross-reactive antigen.
 
     0.455
KRL93489.1
Hypothetical protein.
 
     0.453
KRL94079.1
Hypothetical protein.
  
     0.440
KRL93855.1
NAD-dependent aldehyde dehydrogenase.
    
 0.435
KRL93857.1
Methylated DNA-protein cysteine methyltransferase.
  
    0.428
Your Current Organism:
Lactobacillus hammesii
NCBI taxonomy Id: 1423753
Other names: L. hammesii DSM 16381, Lactobacillus hammesii DSM 16381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.