STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL93598.1Transcriptional regulator. (234 aa)    
Predicted Functional Partners:
KRL93597.1
ADP-ribosylglycohydrolase.
 
    0.885
KRL94399.1
Transcriptional regulator.
  
     0.729
KRL96706.1
AraC family transcriptional regulator.
 
  
 0.535
KRL98254.1
Imidazolonepropionase related amidohydrolase.
 
 
 0.523
KRL98258.1
AraC family transcriptional regulator.
 
  
 0.522
KRL93599.1
Translation elongation factor (GTPase).
       0.458
KRL93399.1
Ribokinase family sugar kinase; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.426
KRL93596.1
Hypothetical protein.
       0.424
KRL93582.1
AraC family transcriptional regulator.
  
    0.407
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.406
Your Current Organism:
Lactobacillus hammesii
NCBI taxonomy Id: 1423753
Other names: L. hammesii DSM 16381, Lactobacillus hammesii DSM 16381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.