STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL93308.1Glycosyl hydrolase family 2, TIM barrel domain protein; Belongs to the glycosyl hydrolase 2 family. (603 aa)    
Predicted Functional Partners:
KRL93798.1
Beta-galactosidase.
 
 0.981
KRL93583.1
O-glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
 
 0.871
KRL93307.1
Hypothetical protein.
 
     0.855
KRL97342.1
Hypothetical protein.
 
 0.830
KRL93116.1
Transcriptional regulator sugar kinase.
    
 0.821
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.820
KRL93310.1
Glycosyl hydrolase family protein.
 
 
 0.789
KRL93306.1
Major facilitator superfamily protein.
 
  
 0.676
uxaC-2
Glucuronate isomerase.
 
 
 0.594
KRL98256.1
Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose.
  
 
 0.562
Your Current Organism:
Lactobacillus hammesii
NCBI taxonomy Id: 1423753
Other names: L. hammesii DSM 16381, Lactobacillus hammesii DSM 16381
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