STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL93338.1Beta-fructosidase. (978 aa)    
Predicted Functional Partners:
KRL97574.1
Adhesion exoprotein.
 
  0.910
KRL97610.1
Hypothetical protein.
 
 0.875
KRL94301.1
Hypothetical protein.
 
 
 0.811
KRL93242.1
Adhesion exoprotein.
 
 
0.779
KRL93806.1
Hypothetical protein.
 
     0.774
KRL94331.1
Cell surface protein, gy family.
  
     0.772
KRL98265.1
Hypothetical protein.
 
     0.771
KRL93091.1
Hypothetical protein.
  
     0.766
KRL98287.1
Hypothetical protein.
 
     0.757
KRL93345.1
Hypothetical protein.
  
     0.750
Your Current Organism:
Lactobacillus hammesii
NCBI taxonomy Id: 1423753
Other names: L. hammesii DSM 16381, Lactobacillus hammesii DSM 16381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.