STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL93564.1ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (322 aa)    
Predicted Functional Partners:
KRL93563.1
ABC-type uncharacterized transport system, periplasmic component.
 
  0.989
KRL93561.1
ABC-type uncharacterized transport system, periplasmic component.
 
  0.987
KRL93565.1
ABC-type uncharacterized transport system, ATPase component.
 
  0.983
KRL93559.1
ABC-type uncharacterized transport system, ATPase component.
 
  0.945
KRL94131.1
Hypothetical protein.
    
  0.621
Your Current Organism:
Lactobacillus hammesii
NCBI taxonomy Id: 1423753
Other names: L. hammesii DSM 16381, Lactobacillus hammesii DSM 16381
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.