STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL97821.1Transposase IS4 family protein. (451 aa)    
Predicted Functional Partners:
KRL94341.1
Hypothetical protein.
 
  
 0.866
KRL94343.1
Hypothetical protein.
 
  
 0.694
KRL94340.1
Restriction enzyme.
 
  
 0.672
KRL95818.1
Fibronectin-binding protein.
  
  
 0.628
KRL94337.1
Hypothetical protein.
  
  
 0.626
KRL94342.1
Hypothetical protein.
 
    0.556
KRL94338.1
Restriction enzyme.
 
    0.510
KRL93583.1
O-glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
   
    0.437
Your Current Organism:
Lactobacillus hammesii
NCBI taxonomy Id: 1423753
Other names: L. hammesii DSM 16381, Lactobacillus hammesii DSM 16381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.