STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL96184.1Sortase related acyltransferase. (158 aa)    
Predicted Functional Partners:
KRL93195.1
SAM-dependent methyltransferase.
 
      0.679
KRL96182.1
Hypothetical protein.
       0.522
KRL96183.1
Hypothetical protein.
       0.522
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.515
KRL93457.1
acyl-CoA dehydrogenase.
   
 
 0.514
metG
methyonyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
    
  0.494
KRL96185.1
Branched-chain amino acid permease (azaleucine resistance).
       0.456
KRL98258.1
AraC family transcriptional regulator.
  
 
 0.454
KRL96706.1
AraC family transcriptional regulator.
  
 
 0.454
mprF
Integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
  
    0.446
Your Current Organism:
Lactobacillus hammesii
NCBI taxonomy Id: 1423753
Other names: L. hammesii DSM 16381, Lactobacillus hammesii DSM 16381
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