STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL95805.1Transcriptional regulator. (174 aa)    
Predicted Functional Partners:
KRL93882.1
Hypothetical protein.
  
     0.715
KRL94813.1
Hypothetical protein.
  
   0.685
KRL98240.1
Multimeric flavodoxin WrbA.
  
     0.591
KRL95804.1
Immunity protein PlnI.
 
     0.590
KRL93401.1
Transcriptional regulator.
  
     0.564
KRL94705.1
TPR repeat-containing protein.
  
     0.534
KRL94387.1
Signal transduction protein.
  
     0.512
KRL93805.1
Hypothetical protein.
  
     0.509
KRL93843.1
Hypothetical protein.
  
     0.496
KRL93624.1
Transcriptional regulator.
  
     0.482
Your Current Organism:
Lactobacillus hammesii
NCBI taxonomy Id: 1423753
Other names: L. hammesii DSM 16381, Lactobacillus hammesii DSM 16381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.